Minggu, 10 Juni 2012

Lactams

          A cyclic amide that is the nitrogen analog of a lactone. For example, a γ-aminobutyric acid readily forms γ-butyrolactam (also known as 2-pyrrolidinone) upon heating, as in the reaction below. The tautomeric enol form of a lactam is known as a lactim.





          The δ-amino acids similarly form δ (six-membered-ring) lactams upon heating, but larger- and smaller-ring lactams must be made by indirect methods.
Several lactams are of considerable industrial importance. 2-Pyrrolidinone and 1-methyl-2-pyrrolidinone are made by heating γ-butyrolactone with ammonia and methylamine, respectively. They are useful specialty solvents. Vinylation of 2-pyrrolidinone with acetylene gives 1-vinyl-2-pyrrolidinone, which is polymerized to a substance commonly used in aerosol hair sprays.
The ß-lactam antibiotics comprise two groups of clinically important therapeutic agents, the penicillins and the cephalosporins. In both cases they contain a four-membered or ß-lactam ring which has its nitrogen atom and a carbon atom in common with another ring. Such substances are derived commercially from fermentation processes, followed usually by chemical manipulation of the functional groups. See also Amino acids; Biochemical engineering; Lactone.
         any intramolecular cyclic amide produced by the formal removal of a molecule of water between the amino and the carboxyl groups of an amino acid, other than an α-amino acid. A prefix (as in β-lactam) may be used to designate the position of the amino group in the parent compound. A lactam commonly exists in tautomeric equilibrium with its corresponding lactim.

Lactones, lactams, lactims, and analogues

          Compounds that may be considered as derived from a hydroxy catboxylic acid or amino carboxylic acid by loss of water intramolecularly are called generically "lactones" or "lactams", respectively. Tautomeric forms of lactams are called "lactims". In these recommendations, such compounds are preferably named as heterocycles although names that may be considered to be derived from the corresponding hydroxy or amino acid are also given. R-5.7.5.1 Lactones. Inrtamolecular esters of hydroxy carboxylic acids are "lactones" and are named as heterocycles or by substituting "-olactone" for the "-ic acid" ending of a trivial name of a hydroxy acid, or "-lactone" for the "-ic acid" ending of a systematic "-oic acid" name for the nonhydroxylated parent acid, and inserting a locant designating the position of the hydroxy group between the "o" and "lactone"

Example to R-5.7.5.1

Heterocycles in which one or more (but not all) rings of a polycyclic ring system are lactones are named bu adding the suffix "-carbolactone" (denoting a cyclic group) to the name of the ring system left after the residue is replaced by two hydrogen atoms, preceded by a pair of locants indicating the points of attachment of the carbonyl group and the oxygen atom of the lactone, respectively; the locant for the carbonyl group is cited first, and, if there is a choice, is the lower locant. Multiplying prefixes and pairs of locants separated by a colon denote the precence of two or more lactone rings.
Examples to R-5.7.5.1


(R-2.4.2.1)

(R-2.4.4.1)

R-5.7.5.2 Sultones. Intramolecular esters of hydroxy sulfonic acids are called "sultones" and are named as heterocycles or by citing the term "sultone" denoting the cyclic group after the name of the appropriate parent hydride preceded by a pair of locants describing the points of attachment of the sulfonyl group and oxygen atom, respectively; the locant for the sulfonyl group is cited first and, if there is a choice, is the lower locant. Multiplying prefixes and pairs of locants separated by a colon are used to indicate two or more sultone rings.
Examples to R-5.7.5.2

R-5.7.5.3 Lactams and lactims. Nitrogen analogues of lactones having the group as part of a ring or ring system are called generically "lactams" and their tautomers, , are "lactims". These compounds are named as heterocyclic compounds or in accordance with R-5.7.5.1 using "-lactam" or "-lactim", respectively, in place of "-lactone". Names such as "propiolactam" and "butyrolactim" are not included in these recommendations.

Examples to R-5.7.5.3

Tetrahydropyrrol-2-one
Pyrrolidin-2-one (2-Pyrrolidone)
Butano-4-lactam
R-5.7.5.4 Sultams. Nitrogen analogues of sultones having the group as a part of a ring are named as heterocycles or in accordance with R-5.7.5.2 using "sultam" in place of "sultone". The locant for the point of attachment of the sulfonyl group is cited first and, where there is a choice, has preference over the imino group for lower locant.
Examples to R-5.7.5.4

Kamis, 07 Juni 2012

Hydrolysis of amides

MECHANISM OF THE ACID catalyzed  HYDROLYSIS OF AMIDES

Step 1:
An acid/base reaction. Since we only have a weak nucleophile and a poor electrophile we need to activate the ester. Protonation of the amide carbonyl makes it more electrophilic.
hydrolysis of an ester with acid catalysis
Step 2:
The water O functions as the nucleophile attacking the electrophilic C in the C=O, with the electrons moving towards the oxonium ion, creating the tetrahedral intermediate.
Step 3:
An acid/base reaction. Deprotonate the oxygen that came from the water molecule.
Step 4:
An acid/base reaction. Need to make the -NH2 leave, but need to convert it into a good leaving group first by protonation.
Step 5:
Use the electrons of an adjacent oxygen to help "push out" the leaving group, a neutral ammonia molecule.
Step 6:
An acid/base reaction. Deprotonation of the oxonium ion reveals the carbonyl in the carboxylic acid product and regenerates the acid catalyst.



The above reaction under acidic conditions:
  • Note that the acid catalysed mechanism is analogous to the acid catalysed hydrolysis of esters.
  • The mechanism shown below proceeds via protonation of the carbonyl not the amide N (see step 1).
  • The mechanism is an example of the less reactive system type.

Hydronium

           In chemistry, a hydronium ion is the cation H3O+, a type of oxonium ion produced by protonation of water. This cation is often used to represent the nature of the proton in aqueous solution, where the proton is highly solvated (bound to a solvent). The reality is far more complicated, and a proton is bound to several molecules of water, such that other descriptions such as H5O2+, H7O3+ and H9O4+ are increasingly accurate descriptions of the environment of a proton in water. The ion H3O+ has been detected in the gas phase.

Determination of pH

           It is the presence of hydronium ion relative to hydroxide that determines a solution's pH. Water molecules auto-dissociate into hydronium and hydroxide ions in the following equilibrium:
2 H2O is in equilibrium with OH + H3O+
           In pure water, there is an equal number of hydroxide and hydronium ions. At 25 °C and atmospheric pressure their concentrations are approximately equal to 1.0 × 10−7 mol∙dm−3. For these conditions, [H3O+] = 10−pH so pH = 7 is defined as neutral. A pH value less than 7 indicates an acidic solution, and a pH value more than 7 indicates a basic solution. Note that [H3O+]×[OH], the ionic product of water, strongly increases with temperature so [H3O+] is not equal to 10−pH for temperatures other than 25 °C.

Nomenclature

          According to IUPAC nomenclature of organic chemistry, the hydronium ion should be referred to as oxonium. Hydroxonium may also be used unambiguously to identify it. A draft IUPAC proposal also recommends the use of oxonium and oxidanium in organic and inorganic chemistry contexts, respectively.
An oxonium ion is any ion with a trivalent oxygen cation. For example, a protonated hydroxyl group is an oxonium ion, but not a hydronium.

Structure

           Since O+ and N have the same number of electrons, H3O+ is isoelectronic with ammonia. As shown in the images above, H3O+ has a trigonal pyramid geometry with the oxygen atom at its apex. The H-O-H bond angle is approximately 113°, and the center of mass is very close to the oxygen atom. Because the base of the pyramid is made up of three identical hydrogen atoms, the H3O+ molecule's symmetric top configuration is such that it belongs to the C3v point group. Because of this symmetry and the fact that it has a dipole moment, the rotational selection rules are ΔJ = ±1 and ΔK = 0. The transition dipole lies along the c axis and, because the negative charge is localized near the oxygen atom, the dipole moment points to the apex, perpendicular to the base plane.

Acids and acidity

             Hydronium is the cation that forms from water in the presence of hydrogen ions. These hydrons do not exist in a free state: they are extremely reactive and are solvated by water. An acidic solute is generally the source of these hydrons; however, hydroniums exist even in pure water. This special case of water reacting with water to produce hydronium (and hydroxide) ions is commonly known as the self-ionization of water. The resulting hydronium ions are few and short-lived. pH is a measure of the relative activity of hydronium and hydroxide ions in aqueous solutions. In acidic solutions, hydronium is the more active, its excess proton being readily available for reaction with basic species.

           Hydronium is very acidic: at 25 °C, its pKa is -1.74.  It is also the most acidic species that can exist in water (assuming sufficient water for dissolution)(see leveling effect): any stronger acid will ionize and protonate a water molecule to form hydronium. The acidity of hydronium is the implicit standard used to judge the strength of an acid in water: strong acids must be better proton donors than hydronium, otherwise a significant portion of acid will exist in a non-ionized state. Unlike hydronium in neutral solutions that result from water's autodissociation, hydronium ions in acidic solutions are long-lasting and concentrated, in proportion to the strength of the dissolved acid.
          pH was originally conceived to be a measure of the hydrogen ion concentration of aqueous solution. We now know that virtually all such free protons quickly react with water to form hydronium; acidity of an aqueous solution is therefore more accurately characterized by its hydronium concentration. In organic syntheses, such as acid catalyzed reactions, the hydronium ion (H3O+) can be used interchangeably with the H+ ion; choosing one over the other has no significant effect on the mechanism of reaction.

Solvation

           Researchers have yet to fully characterize the solvation of hydronium ion in water, in part because many different meanings of solvation exist. A freezing-point depression study determined that the mean hydration ion in cold water is approximately H3O+(H2O)6: on average, each hydronium ion is solvated by 6 water molecules which are unable to solvate other solute molecules.
Some hydration structures are quite large: the H3O+(H2O)20 magic ion number structure (called magic because of its increased stability with respect to hydration structures involving a comparable number of water molecules) might place the hydronium inside a dodecahedral cage.However, more recent ab initio method molecular dynamics simulations have shown that, on average, the hydrated proton resides on the surface of the H3O+(H2O)20 cluster. Further, several disparate features of these simulations agree with their experimental counterparts suggesting an alternative interpretation of the experimental results.
Zundel cation
Two other well-known structures are the Zundel cations and Eigen cations. The Eigen solvation structure has the hydronium ion at the center of an H9O+
4
complex in which the hydronium is strongly hydrogen-bonded to three neighbouring water molecules. In the Zundel H5O+
2
complex the proton is shared equally by two water molecules in a symmetric hydrogen bond.Recent work indicates that both of these complexes represent ideal structures in a more general hydrogen bond network defect.
Isolation of the hydronium ion monomer in liquid phase was achieved in a nonaqueous, low nucleophilicity superacid solution (HF-SbF5SO2). The ion was characterized by high resolution O-17 nuclear magnetic resonance.
            A 2007 calculation of the enthalpies and free energies of the various hydrogen bonds around the hydronium cation in liquid protonated water. at room temperature and a study of the proton hopping mechanism using molecular dynamics showed that the hydrogen-bonds around the hydronium ion (formed with the three water ligands in the first solvation shell of the hydronium) are quite strong compared to those of bulk water.
A new model was proposed by Stoyanov. based on infrared spectroscopy in which the proton exists as an H13O+
6
ion. The positive charge is thus delocalized over six water molecules.

Motivation for study

Interstellar H3O+


          Hydronium is an abundant molecular ion in the interstellar medium and is found in diffuse and dense molecular clouds as well as the plasma tails of comets. Interstellar sources of hydronium observations include the regions of Sagittarius B2, Orion OMC-1, Orion BN–IRc2, Orion KL, and the comet Hale-Bopp. Interstellar hydronium is formed by a chain of reactions started by the ionization of H2 into H+
2
by cosmic radiation. H3O+ can produce either OH or H2O through dissociative recombination reactions, which occur very quickly even at the low (≥10 K) temperatures of dense clouds. This leads to hydronium playing a very important role in interstellar ion-neutral chemistry.
          Astronomers are especially interested in determining the abundance of water in various interstellar climates due to its key role in the cooling of dense molecular gases through radiative processes.However, H2O does not have many favorable transitions for ground based observations. Although observations of HDO (the deuterated version of water) could potentially be used for estimating H2O abundances, the ratio of HDO to H2O is not known very accurately.
          Hydronium, on the other hand, has several transitions that make it a superior candidate for detection and identification in a variety of situations. This information has been used in conjunction with laboratory measurements of the branching ratios of the various H3O+ dissociative recombination reactions to provide what are believed to be relatively accurate OH and H2O abundances without requiring direct observation of these species.




Kamis, 31 Mei 2012

Amides are organic chemical compounds that include the -amide functional group:
Amide Group
That is, amides are a class or category of organic chemical compounds that (usually*) include a part consisting of a carbon atom connected to both:
  • a nitrogen atom connected to two hydrogen atoms by single covalent bonds between the nitogen and each of the hydrogen atoms (that is an -amine group).
    AND
  • an oxygen atom (connected to the carbon atom by a double covalent bond).
Amide molecules can vary in size up to very long molecules most of which consist of carbon atoms attached to each other and also to hydrogen atoms.

The hydrolysis of amides What is hydrolysis?
Technically, hydrolysis is a reaction with water. That is exactly what happens when amides are hydrolysed in the presence of dilute acids such as dilute hydrochloric acid. The acid acts as a catalyst for the reaction between the amide and water.
The alkaline hydrolysis of amides actually involves reaction with hydroxide ions, but the result is similar enough that it is still classed as hydrolysis.
Hydrolysis under acidic conditions
Taking ethanamide as a typical amide:
If ethanamide is heated with a dilute acid (such as dilute hydrochloric acid), ethanoic acid is formed together with ammonium ions. So, if you were using hydrochloric acid, the final solution would contain ammonium chloride and ethanoic acid.



Note:  You might argue that because the hydrochloric acid is changed during the reaction, it isn't acting as a catalyst. In fact, it is doing two things. It is acting as a catalyst in a reaction between the amide and water which would produce ammonium ethanoate (containing ammonium ions and ethanoate ions). It is secondly reacting with those ethanoate ions to make ethanoic acid.


Hydrolysis under alkaline conditions
Again, taking ethanamide as a typical amide:
If ethanamide is heated with sodium hydroxide solution, ammonia gas is given off and you are left with a solution containing sodium ethanoate.

Using alkaline hydrolysis to test for an amide
If you add sodium hydroxide solution to an unknown organic compound, and it gives off ammonia on heating (but not immediately in the cold), then it is an amide.
You can recognise the ammonia by smell and because it turns red litmus paper blue.
The possible confusion using this test is with ammonium salts. Ammonium salts also produce ammonia with sodium hydroxide solution, but in this case there is always enough ammonia produced in the cold for the smell to be immediately obvious.


Note:  This test is OK for UK A level purposes, but there are other things which also give off ammonia on heating with sodium hydroxide solution - for example, nitriles (but you won't come across them in a practical situation at this level) and imides (but they are beyond the scope of courses at this level).



Amide

          amide , organic compound formed by reaction of an acid chloride, acid anhydride, or ester with an amine. Under strong acidic conditions an amide can be hydrolyzed to yield an amine and a carboxylic acid. The reverse of this process results in the loss of water and is used in nature to link amino acids to form proteins

           In chemistry, the term amide has several meanings. It may refer to a particular inorganic anion, it may refer to a functional group found in organic compounds, or to compounds that contain this functional group.

           The amide anion is the conjugate base of ammonia, NH2-. It is an extremely strong base, due to the extreme weakness of ammonia as a Bronsted acid.
           Amides are the members of a group of chemical compounds containing nitrogen. Specifically, an amide is a derivative of a carboxylic acid in which the hydroxyl group has been replaced by an amine or ammonia.
Compounds in which a hydrogen atom on nitrogen from ammonia or an amine is replaced by a metal cation are also known as amides or azanides. The amide functional group is:
Amide Functional Group

Synthesis and breakdown

Amides are commonly formed from the reaction of a carboxylic acids with an amine:
Amide Formation
This is the reaction that forms peptide bonds between amino acids. These amides can participate in hydrogen bonding as hydrogen bond acceptors and donors, but do not ionize in aqueous solution, whereas their parent acids and amines are almost completely ionized in solution at neutral pH.
Amide formation plays a role in the synthesis of some condensation polymers, such as nylon. Their breakdown is possible via amide hydrolysis.

Amide linkages

An amide linkage is kinetically stable to hydrolysis. Amide linkages in a biochemical context are called peptide linkages. Amide linkages constitute a defining molecular feature of proteins, the secondary structure of which is due in part to the hydrogen bonding abilities of amides.

Derivatives

Sulfonamides are analogs of amides in which the atom double bonded to oxygen is sulfur rather than carbon.

Naming

  • Example: CH3CONH2 is named acetamide or ethanamide
  • Other examples: propan-1-amide, N,N-dimethylpropanamide
.


The most commonly discussed amide is ethanamide, CH3CONH2 (old name: acetamide).
The three simplest amides are:
HCONH2methanamide
CH3CONH2ethanamide
CH3CH2CONH2propanamide
Notice that in each case, the name is derived from the acid by replacing the "oic acid" ending by "amide".
If the chain was branched, the carbon in the -CONH2 group counts as the number 1 carbon atom. For example: